Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015949147.1_cds_XP_016490178.1_80623
CDS Infomation

[gene=LOC107809977] [db_xref=GeneID:107809977] [protein=lariat debranching enzyme-like] [protein_id=XP_016490178.1] [location=join(35292..35414,35874..36031,36152..36273,36495..36688,49372..49554,49643..49761,49842..49981,54519..54614,55487..55584)] [gbkey=CDS]
Sequence

ATGAGGATAGCAGTAGAAGGGTGTATGCACGGAGACTTGGATAATGTCTATGCCACCCTA
TTGCAGTTGCAAGAAGTTGAGAATATAAAGATTGATCTCCTTTTGTGTTGTGGTGACTTT
CAGGCTGTTAGGAATGAGAAGGATCTGGAAAGCTTAAATGTGCCACTTAAATACCGGAGC
ATGAACTCTTTCTGGAAGTATTACTCAGGAGAGAAAGTAGCACCATTTCCAACTATATTT
ATTGGAGGAAACCATGAAGCATCCAATTACCTTTGGGAATTGTACTATGGAGGATGGGCA
GCACCTCAGATATACTTCCTTGGATTTGCTGGAGTAATCAAGTTTGGCAATGTTCGTATT
GGTGGCCTTTCCGGAATTTATAAATCACACGATTACAATCGGGGGCACTATGAGAAGCTG
CCTTATAATCAACGGGATATTCGATCTATATATCATGTTCGTGAGTATGATGTTCACAAG
CTCTTGCAAGTTGAGGAACCAATTGATATCTTTCTTTCACATGACTGGCCTGTTGGCATC
ACTGACTGTGGGAACTTGAAAGCTCTTCTTCGTCAGAAGCCTTTCTTTGAGCAAGAGATT
CAGGAAGGAACTCTGGGAAGCAGACCTGCTGCAGAATTACTGGCAAAGTTGACGCCTTCT
TACTGGTTTTCTGCACATCTGCACTGCAAATTTGCTGCTTTAGTTCAGCATGAGAAGGAT
GGTCCTTCCACAAAGTTTCTTGCCCTCGACAAGTGCCTCCCTGGTAGAAAGTTTTTACAG
GTTATTGAAATTGAGTCCGGACCAGGACCTCATGAACTTCAATTTGATGAAGAATGGTTG
GCAATCACAAGAAAGTATAATGCTGTCTTGCCCTTGACAATCAGGAGTGCAAACTATAGT
GATGTACATCTCGACACAGAAGAATGCCACCAGTTTGTAAGAAATAAGCTGCAGACAAGA
GGATCCAAACCGTTTGAATTTGTTCAGACTGCACCATGCTACAATCCTTATCACCCTGTT
GCTAATGGTGTCTTCCACGGTTTCTATAAAAACCCTCAGACAGAAGCTCTATTACAGTTT
CTAGAACTCGAGTATGTTCTTAATAAAATGCCAGAATCAAGGGAGCCTGCTGCAGGTTCC
TTTGATTACGAGAGTGAAGATATACCCATAGATGATGTGGATGTGGATGTGGATGTGGAT
GATATCAACAAAGTGGACTCGGAAGATGCTTAA

Peptide Sequence

PEP ID

XP_016490178.1
PEP Infomation

PREDICTED: lariat debranching enzyme-like [Nicotiana tabacum]
Sequence

MRIAVEGCMHGDLDNVYATLLQLQEVENIKIDLLLCCGDFQAVRNEKDLESLNVPLKYRS
MNSFWKYYSGEKVAPFPTIFIGGNHEASNYLWELYYGGWAAPQIYFLGFAGVIKFGNVRI
GGLSGIYKSHDYNRGHYEKLPYNQRDIRSIYHVREYDVHKLLQVEEPIDIFLSHDWPVGI
TDCGNLKALLRQKPFFEQEIQEGTLGSRPAAELLAKLTPSYWFSAHLHCKFAALVQHEKD
GPSTKFLALDKCLPGRKFLQVIEIESGPGPHELQFDEEWLAITRKYNAVLPLTIRSANYS
DVHLDTEECHQFVRNKLQTRGSKPFEFVQTAPCYNPYHPVANGVFHGFYKNPQTEALLQF
LELEYVLNKMPESREPAAGSFDYESEDIPIDDVDVDVDVDDINKVDSEDA

Transcript Sequence

Gene sequence data has not been registered.